Preview

IZVESTIYA OF TIMIRYAZEV AGRICULTURAL ACADEMY

Advanced search

Genetic diversity of varieties and lines of naked oats of the selection of FRC “Nemchinovka”

https://doi.org/10.26897/0021-342X-2023-5-62-74

Abstract

To assess the control of biotype constancy of naked oat varieties during cultivation, a highly effective method of electrophoresis of spare seed proteins – prolamins– is increasingly used in primary seed production. The aim of the research was to certify naked oatvarieties of the FRC “Nemchinovka” selection and to analyze their genetic diversity using alleles of avenin-coding loci.Chemical-technological, computational-constructive and statistical research methods were used in the work. The method of electrophoresis of spare alcohol–soluble proteins of oats – avenins – was used. Electrophoresis was carried out in vertical plates of 13.2% polyacrylamide gel at a constant voltage of 500 V using VE-20 electrophoretic chambers (Helicon, Russia). As a result of the conducted studies, it was found that all the analyzed samples were heterogeneous in the composition of avenin components, with the number of biotypes ranging from 2 to 14 pcs. The frequency of occurrence of biotypes in the samples varied from 1.0 to 97.0%. The blocks of avenin components missing in the catalog of genetic nomenclature were found: four blocksby Avn A locus, two blocksby Avn B locus, and one blockby Avn C locus. Their probable component composition was determined. A high value of the average gene diversity was found for all three loci. This indicates the effective use of genetically diverse source material in the breeding process.

About the Authors

A. D. Kabashov
Federal Research Center “Nemchinovka”

Aleksandr D. Kabashov, CSc (Ag), Acting Head of the Laboratory of Breeding and Primary Seed Production of Oats

6, Agrokhimikov Str, Novoivanovskoe workers’settlement, Odintsovo, Moscow Region, 143026



A. V. Lyubimova
Federal Research Centre “The Tyumen Scientific Centre of the Siberian Branch of the Russian Academy of Sciences”

Anna V. Lyubimova, CSc (Bio), Head of the Laboratory

86, Malygina Str., Tyumen, 625026



N. M. Vlasenko
Federal Research Center “Nemchinovka”

Nikolay M. Vlasenko, CSc (Ag), Leading Research Associate, Laboratory of Breeding and Primary Seed Production of Oats

6, Agrokhimikov Str, Novoivanovskoe workers’settlement, Odintsovo, Moscow Region, 143026



A. S. Kolupaeva
Federal Research Center “Nemchinovka”
Russian Federation

Anastasia S. Kolupaeva, Research Associate, Laboratory of Breeding and Primary Seed Production of Oats

6, Agrokhimikov Str, Novoivanovskoe workers’settlement, Odintsovo, Moscow Region, 143026



References

1. Glotov N.V., Zhivotovsky L.A., Khovanov N.V., Khromov-Borisov N.N. Biometrics: Textbook. Leningrad: Leningradskiy gosudarstvenniy universitet im. A.S. Pushkina, 1982:26. (In Russ.)

2. Novosel’skaya-Dragovich A.Yu., Bespalova L.A., Shishkina A.A. et al. Study of the genetic diversity of soft winter wheat varieties by gliadin-coding loci. Russian Journal of Genetics. 2015;51(3):324. (In Russ.) https://doi.org/10.7868/S0016675815030108

3. Sidorova V.V., Konarev A.V. (сomp.). Molecular biological studies of the gene pool of cultivated plants at VIR (1967–2007). 2nd ed., add. St. Petersburg: VIR, 2007:134. (In Russ.)

4. Konarev A.V. The use of molecular markers in solving problems of plant genetic resources and selection. Agrarnaya Rossiya. 2006;6:4–22. (In Russ.)

5. Lyubimova A.V. Studying the nature of inheritance of avenin components in F2 hybrids from crossing oat varieties of Siberian selection. Agrarian Bulletin of the Urals. 2022;2(217):48–59. (In Russ.) https://doi.org/10.32417/1997-4868-2022-217-02-48-59

6. Pomortsev A.A., Rubanovich A.V., Lyalina E.V. The polymorphism structure of hordeins encoded by the Hrd A and Hrd B loci in wild barley (Hordeum spontaneum C. Koch). Russian Journal of Genetics. 2022;58(3):267–298. (In Russ.) https://doi.org/10.31857/S0016675822030110

7. Portyanko V.A., Pomortsev A.A., Kalashnik N.A., Bogachkov V.I., Sozinov A.A. Genetic control of avenins and principles of their classification. Russian Journal of Genetics. 1987;23(5):845–853. (In Russ.)

8. Eugene Metakovsky, Viktor Melnik, Marta Rodriguez-Quijano, Vladimir Upelniek, Jose Maria Carrillo. A catalog of gliadin alleles: Polymorphism of 20th-century common wheat germplasm. The Crop Journal. 2018;6(6):628–641. https://doi.org/10.1016/j.cj.2018.02.003

9. Hailegiorgis D, Lee C.A, Yun S.J. Allelic variation at the gliadin coding loci of improved Ethiopian durum wheat varieties. Journal of Crop Science and Biotechnology. 2017;20(4):287–293.

10. Kamal N., Tsardakas Renhuldt N., Bentzer J. et al. The mosaic oat genome gives insights into a uniquely healthy cereal crop. Nature. 2022;606:113–119. https://doi.org/10.1038/s41586-022-04732-y

11. Kapala A. Variability of electrophoretic subunit patterns of hordein proteins in spring barley (Hordeum vulgare L.). Genetica Polonica. 1981;22(2):163–176.

12. Nielsen G., Johansen H.B. Proposal for identification of barley varieties based on the genotypes for 2 hordein and 39 isoenzyme loci of 47 reference varieties. Euphytica. 1986;35:717–728.

13. Nevo E., Beiles A., Storch N. Microgeographic edaphic differentiation in hordein polymorphism of wild barley. Theor. Appl. Genet. 1983;64:123–132.

14. Nei M., Li W. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA, 1979;76:5269–5273.


Review

For citations:


Kabashov A.D., Lyubimova A.V., Vlasenko N.M., Kolupaeva A.S. Genetic diversity of varieties and lines of naked oats of the selection of FRC “Nemchinovka”. IZVESTIYA OF TIMIRYAZEV AGRICULTURAL ACADEMY. 2023;(5):62-74. (In Russ.) https://doi.org/10.26897/0021-342X-2023-5-62-74

Views: 102


Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.


ISSN 0021-342X (Print)